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dtoro 5e3b946ded cleanup: fix all stale references across .agents/ docs

- Rewrite AGENTS.md: DB as source of truth, MCP knowledge tools, archive refs
- Fix OIKOS.md: seeds/ paths, remove Python-era notes, update deployment status
- Fix commands.md, agent-enrollment.md: archive/knowledge/ links
- Fix all SKILL.md files: remove hosts/*.yaml refs, point to inventory.yaml
- Fix HERMES.md, schema.md, page-templates.md, llm-wiki.md: update paths
- Fix bootstrap.sh: identity check reads inventory.yaml
- Fix README.md, cutover-checklist.md: stale wiki references
- Move convert-wiki.py to archive/ (one-shot done)

2026-07-07 21:00:39 +02:00

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Knowledge domain — schema

The knowledge domain is the durable, authoritative current-state documentation of the homelab: one page per node and per cross-cutting system, synthesized from live state and evidence. It answers "what exists and how does it work right now."

It follows the LLM Wiki layer model and the writing-style and page-templates rules.

The narrative / substrate split

The knowledge wiki is narrative. It sits alongside a machine-readable substrate that it describes but never contains. The split is load-bearing: several programs read the substrate at fixed paths, so the wiki reorganization never moves it.

Layer	Location	Consumed by
Substrate — source of truth	`inventory.yaml` (root)	MCP server, `homelab` CLI, `oikos/` scheduler/drift/relations/gen-topology
Substrate — generated host records	`inventory.yaml` (root)	Go `internal/mcp/` server, `bin/homelab`; the single source of truth
Substrate — kernel + context cards	`oikos/` (code, `oikos/cards/`, `oikos/state.json`)	MCP `explain`, scheduler
Narrative — synthesized wiki	`archive/knowledge/{hosts,containers,vms,infrastructure}/`	humans, agents via MCP `get_page` / `search_docs`
Evidence — immutable sources	`knowledge/sources/` (references + investigations)	synthesis into wiki pages

Wiki pages

Node pages (archive/knowledge/containers/<id>-<name>.md, .../vms/<id>-<name>.md, .../hosts/<name>.md) follow the container/host template in page-templates.md: opening definition, ## At a glance, ## Role, service/port map, storage, auto-deploy, ## Related, ## Changelog.
Cross-cutting pages (archive/knowledge/infrastructure/<topic>.md) follow the cross-cutting template: ## Why, ## Components, ## How to apply, ## Gotchas, ## Related, ## Changelog.
Each inventory.yaml host entry carries a doc_page: field pointing at its narrative page. Changing where a page lives means updating that field (read by bin/homelab).

The two logs

The per-page ## Changelog records infrastructure changes and is machine-parsed (get_changelog, the Oikos ledger). Keep the ### YYYY-MM-DD — title shape.
knowledge/log.md is append-only and records documentation-maintenance operations only (restructures, source ingests, lint sweeps): ## [YYYY-MM-DD] <op> | <summary>. It never duplicates the Oikos change ledger (oikos/ledger.py).

Same-session update rule

A change to a node updates every page that references it in the same session — the node page, the section README.md table, the root README.md, the Caddy/DNS/ingress pages, the host page, and inventory.yaml. See page-templates.md.

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