Commit Graph

4 Commits

Author SHA1 Message Date
f1b0b65149 phase 2 review: fix SSE deadlock, MCP panic, lifecycle 500, NOT NULL bug
Reviewed the phase-2 implementation (parts 2–5) end to end. The suite hung
for 600s and several handlers were never exercised because there were no
tests for the new mutation/event/MCP surface. Fixes:

- CRITICAL: sseListener ran on context.Background() and held a pooled
  connection forever, so pool.Close() deadlocked (600s test timeout).
  NewHandler now takes a ctx that governs the listener; ListenAndServe and
  the test helper cancel it before closing the pool.
- CRITICAL: MCP AddTool panicked ("missing input schema") at construction
  under go-sdk v1.6.1 — so NewHandler (and every API handler) panicked.
  Added object input schemas to all 8 tools via an objSchema helper.
- HIGH: PatchEntity parsed lifecycle transitions as map[string][]string but
  the shape is {from:{to:{requires:[]}}}, so every state-change PATCH 500'd.
  Parse the nested shape; allow same-state no-ops.
- HIGH: CreateEntity bound SQL NULL for attributes when omitted, violating
  the NOT NULL column (the default only applies when omitted). Default to
  '{}'.
- MED: serveSSEWriter ignored the request ctx (per-client goroutine leak on
  disconnect) and set an invalid Content-Length: -1. Thread ctx through;
  omit the header. writeSSE now nil-checks the flusher (io.Pipe path passed
  nil → would have panicked on first event).
- MED: SSE `data:` leaked raw sqlcgen.Event (PascalCase, base64 JSONB).
  Emit canonical gen.Event so SSE matches GET /events. Verified live.
- LOW: CreateEntity uses uuid.NewV7 (ADR-0005) + real actor from context in
  audit; removed dead bearerAuth; fixed vet unkeyed-field warnings.

Tests (would have caught all of the above): entity create/patch with
If-Match 409/400, valid+invalid lifecycle transitions, idempotency replay,
duplicate-slug 409, abstract-type 422, event+audit side effects, MCP tool
registration. Live smoke test confirmed NOTIFY→listener→SSE delivery.

Also adds the missing Phase 2 deliverable: Gitea Actions CI (vet,
golangci-lint, govulncheck, generated-code drift guard, race tests against
TimescaleDB, docker build) and wires sqlc into `make generate`.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-07 13:26:43 +02:00
f2fe812cda phase 2 (part 1): OpenAPI-generated API server, first 9 endpoints
- api/openapi.yaml converted 3.1 → 3.0.3 (oapi-codegen/kin-openapi
  supports 3.0; nullable syntax + example keywords), still redocly-clean
- oapi-codegen (v2.4.1, strict server + chi) generates
  internal/httpapi/gen from the spec; `make generate` wired
- internal/httpapi: chi router, /healthz (unauthenticated, SG18),
  RFC 9457 problem+json mapping from domain sentinels (SG11), 5xx detail
  logged server-side only, request logging with request IDs, graceful
  shutdown (SG4), interim static bearer auth (constant-time; dev-open
  when no token; OIDC JWT still to come in Phase 2)
- Implemented: listEntities (type filter walks the hierarchy, keyset
  pagination), getEntity (UUID or slug, ETag), getEntityRelations,
  getBlastRadius, getGraph (nodes+edges for UIs), getOntology,
  listSignals, getFleetHealth, exportSeeds. Remaining 38 ops return 501
  problem+json stubs (compiler-enforced interface completeness)
- `oikos api` role live: migrate-on-start, serves :8090
- 15 API integration tests (auth, pagination, hierarchy filter, ETag,
  404/501 problem shapes, graph, export)

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-07 08:25:19 +02:00
1b04683639 phase 1 review fixes: dedup edges, real export, validation, tests
Review of aa2ca0a found and fixed:
- re-ingest duplicated ALL edges (upsert conflicted on valid_from=now(),
  never fired) — migration 007 dedupes + partial unique index on current
  edges; upsert now targets it. Regression-tested.
- export was a stub that overwrote seeds/*.yaml with 11-byte "version: 1"
  files — implemented real deterministic export (ontology/inventory/policy,
  cognition-layer excluded); round-trip is byte-stable (tested)
- DB password leaked in startup logs (slog JSON bypasses String()) —
  Config now implements slog.LogValuer; regression-tested
- docker-compose had literal '***' as DB password — env-interpolated
- uuid.New() (v4) → uuid.NewV7() per ADR-0005
- no ontology validation on ingest — internal/ontology TypeTree: abstract
  instantiation rejected, relationship endpoints hierarchy-validated,
  cardinality enforced in-transaction, lifecycle states checked, default
  state applied (Phase 1 gate items, R3-1)
- getOrCreateEntityID swallowed non-ErrNoRows errors
- migration runner now holds a session advisory lock on one connection
- Makefile: hardcoded /opt/homebrew/bin/go → go; test-db target

Tests: 4 unit suites + 7 integration tests (env-guarded, throwaway DB per
run): migrate idempotent, seed idempotent + no dup edges, abstract/edge/
cardinality rejection, blast_radius cycle termination, export round-trip.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-07 08:11:01 +02:00
aa2ca0ae6f phase 1: Go foundation — module, migrations, domain, seed ingest
Core deliverables:
- Go module github.com/dtoro/oikos (Go 1.26.3)
- cmd/oikos: single binary with role subcommands (migrate, seed, export)
- 6 SQL migrations: ontology meta-schema, entity instances (UUID+slug,
  blast_radius recursive function), operations (signals/checks/approvals),
  cognition (classifications/executions/feedback/patterns/skills), policy,
  observability (TimescaleDB hypertables + CAGGs + retention)
- Domain layer: entity, signal, execution, classification, pattern, skill,
  approval, check types + 11 sentinel errors + lifecycle state machines
- DB layer: pgx pool, SQL splitter (handles 94436 and -- comments), migration
  runner, seed ingest (ontology+inventory+policy) with content-hash dedup
- Config: env-based with defaults, secrets redaction
- Observability: slog JSON logger with debug mode
- Infrastructure: Makefile, docker-compose.yml, multi-stage Dockerfile
  (distroless, CGO_ENABLED=0)

Verified end-to-end against timescale/timescaledb:2.17.2-pg16:
- 6 migrations applied (65 SQL statements)
- Seeds ingested: 6 lifecycles, 59 entity types, 46 relationship types,
  111 entities, 144 relationships, 4 risk classes, 27 approval rules,
  9 autonomy settings
- Idempotent: second seed run is a no-op (content hash matches)

Bugs fixed during implementation:
- TimescaleDB CAGGs can't run in a transaction -> splitSQL() executes
  statements individually
- Semicolons in -- comments treated as separators -> comment handling
- YAML keys source/target didn't match code's source_type/target_type
- yaml.Marshal produced YAML for JSONB columns -> json.Marshal
2026-07-07 01:07:26 +02:00