26 Commits

Author SHA1 Message Date
5e10437fe3 Phase 4 (Performance) + Phase 6 (Infrastructure) completion
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Phase 4 — Performance:
- F1: SSH DialPool with key-by-host pooling and 5min idle TTL
- F2: In-memory entity lookup cache (TTL 60s, HTTP resolveEntityID)
- F3: Trigram GIN indexes on entities.slug and entities.name (migration 031)
- F4: Partial index on executions(classification_id) for auto-act (migration 032)
- Added missing RunOutput and RunStreaming in actuator/ (E3 gap fill)

Phase 6 — Infrastructure:
- H1: Infisical image pinned to v0.99.1
- H2: execworker daemon — polls pending executions with per-execution
  advisory locks, recovers orphaned running executions, wired as
  docker-compose service
- H3: splitSQL hardened with block comment and string-literal support,
  6 new edge-case tests (11 total)
- H4: Scheduler acquires pg_try_advisory_lock(0x01c05e6) at startup
2026-08-08 23:46:43 +02:00
c3f478b8f8 v0.21.0: agent reliability overhaul — plan integrity, target validation, observability pipelines, learning loop
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P0 — stop the bleeding:
- prevent premature complete_task(success) when goal involves reachability
- validate run targets: block host-only commands (qm/pct/pvesh) on LXC/VM
- bump MCP client timeout 30s→120s to stop 'context deadline exceeded'

P1 — fix the plan system:
- add replaced_reason column to session_plan_steps (migration 030)
- track WHY steps are replaced (wrong_diagnosis/scope_change/superseded/etc)
- force fresh propose_plan on session resume (reopenSession marks old plan)

P2 — cognitive guardrails:
- SOUL.md scope-gate rule: ask before chasing unrelated subsystems
- auto-upsert knowledge entry on every session close

P3 — observability (all were empty/NULL):
- populate agent_activity.token_count from LLM usage (was always NULL)
- populate nomos_plan_executions linking executions to sessions
- write plan_completion_rate metric on task close

P4 — learning loop (all were empty/NULL):
- auto-classify every run call → classifications table (was 0 rows)
- auto-feedback on session close (was 0 rows)
2026-08-04 23:15:47 +02:00
467589d78a fix(nomos): generation-relative plan seq + real activity timestamps
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The plan recorded false history after a re-plan and the activity panel
showed fabricated, churning timestamps. Two bugs compounding on one event
stream.

Plan drift (P0.1):
- proposePlan seq is now 1..N per generation; (session,generation,seq) is
  the addressing key. The model's 1-based update_plan_step calls always map
  to the CURRENT plan after a re-plan, instead of resurrecting a superseded
  `replaced` row as done while the live work went unrecorded.
- updatePlanStep resolves against MAX(generation); a stale/out-of-range seq
  returns errPlanStepNotFound (never touches a superseded generation).
- getPlanSteps returns only the current generation by default; ?all=true
  keeps the audit/eval view (plan_generations assertion).
- completeTask auto-close scopes to the current gen, stamps started_at, and
  emits one plan.step.finished per closed step so the panel converges
  instead of freezing on "running" after completion (P1.1).
- propose_plan result enumerates step seqs; writeback detector matches
  "write back"/"writeback"/"upsert_knowledge" so a natural-language final
  step isn't doubled (P1.2).
- migration 029 renumbers existing seq per generation + unique index.

Activity panel (P0.2 / P1.1, web):
- computeActivityLog uses the real message created_at for tool calls; live
  entries fall back to wall-clock frozen on first sight, killing the 3s
  poll churn. Steps use real started_at.
- dropped plan-step events warn + count instead of a silent no-op.

Tests: TestProposePlan updated; + generation-relative-seq and auto-close
event-emission regression tests; + web activity purity/timestamp tests.

VERSION: 0.14.0 -> 0.14.1
2026-07-30 22:40:56 +02:00
c10f6920cd fix: blast radius walks dependency direction, and reachability survives no ICMP
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Two things the entity window redesign surfaced but deliberately left alone.

**blast_radius answered the wrong question.** It walked source→target for every
relationship type, but which end of an edge is the dependent differs per type:
"machine hosts container" means the target breaks, while "service depends-on
service" and "ingress routes-to service" mean the SOURCE breaks. Walking
everything forwards was right for hosts/provides and backwards for everything
else — and swept in 2,800+ documents/involves/targets edges of pure bookkeeping,
so the result contained tasks and executions that cannot break.

Direction is now declared per relationship type in seeds/ontology.yaml
(blast_direction: forward | backward | none), the same shape as the entity
types' monitoring: declaration, and defaults to none so an undeclared edge
contributes nothing rather than a confidently wrong answer.

It also needed a modelling fix: `routes-to` names an ingress's BACKEND, so
nothing recorded that all 21 public hostnames are terminated by caddy. A
`served-by` edge type now says so.

  pool:ludo-lvm    2 -> 23   (every container storing on it, then their services)
  lxc:caddy        4 -> 22   (service:caddy, then all 21 ingress routes)
  service:authentik      7   (what authenticates via it)

**Every ping check was reporting down.** Not a host:strong false positive: all
seven, including ws:mac-mini — the Docker host itself. The scheduler runs in
Docker on macOS, whose VM does not route ICMP to the LAN; loopback pings succeed
and every LAN ping fails. Under health aggregation each broken probe dragged its
entity to down.

The question the check exists to answer is "is it reachable", and ICMP is only
one way to ask it. checkPing now falls back to a TCP connect before concluding
anything, which restores an honest verdict for the four hosts that are genuinely
up while leaving the genuinely unreachable ones down.

TestBlastRadiusTerminatesOnCycles asserted the old direction (caddy=1,
authentik=2 — the cycle walked the wrong way); it now asserts the corrected
depths, and its exact-node-count check is relaxed because walking the right way
also surfaces the seed's own real dependents, which are correct answers.

Co-Authored-By: Claude <noreply@anthropic.com>
2026-07-29 09:44:17 +02:00
6ca6d5b352 fix(scheduler): derive entity health from all its checks, not the last one
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host:strong logged 226 health.changed events in one hour, oscillating
down/healthy while the host was fine throughout. host:hubris did it 126 times.

runCheck wrote entity_status.health on every check completion, so an entity's
health was simply whichever of its checks finished most recently. A host with
six checks reported whichever facet happened to be sampled last, and one
failing probe alternating with five passing ones flapped forever. resolveSignal
forced "healthy" too, a second path by which one passing probe erased another
probe's genuine failure.

On this fleet the trigger is a known false positive: the scheduler's network
vantage point cannot ICMP host:strong, so its ping check fails while every
ssh-script check succeeds. Under last-writer-wins that single probe declared
the whole host down, twice a minute.

Each check now records its own verdict (check_defs.last_health, migration 027)
and the entity's health is the worst across its enabled checks. A failing probe
now degrades the entity honestly and *stably*, without erasing what the other
five report, and health.changed fires only when that aggregate actually moves.
Checks that have never run are ignored rather than counted as unknown, so
adding a check cannot drag a known-good entity down before it has a verdict.

Also declares service:oikos in the seed. The previous commit re-pointed the mcp
ingress at it, but the entity only ever existed in the production database — so
a fresh seed (a new install, or a DR restore) failed on an unresolvable edge.
Caught by seeding an empty database rather than a copy of prod, which is the
only way that class of bug shows up.

Co-Authored-By: Claude <noreply@anthropic.com>
2026-07-28 21:33:48 +02:00
98e19bb14a Merge remote-tracking branch 'origin/main' into claude/coolify-oikos-comparison-d8c2d3 2026-07-28 14:05:36 +02:00
d7b526a112 fix(scheduler): honour check_defs.interval_s, and renumber migrations off main
ListEnabledCheckDefs selected interval_s but never filtered on it, so every
enabled check ran on every 30s pass and the declared per-check intervals were
decorative. Invisible at 17 enabled checks; at ~180 it would have meant ~126
SSH connections every 30s (~363k/day) and `apt update` on every machine every
30 seconds — 14,400 mirror hits a day to answer a question that changes daily.

- check_defs.last_run_at (migration 026) + a due-ness predicate in the query.
  A column rather than scheduler memory because this control plane restarts on
  every deploy, and an in-memory map would re-fire every check on each restart.
- runCheck stamps last_run_at before processing the result, so a permanently
  failing check backs off to its interval instead of re-running every pass.
- updates and backup-freshness drop to daily. Both answer questions whose
  answers change about once a day; 60s was just the shared ssh-script default.
- last_run_at is seeded to a random offset within the interval so checks
  created by the same seed do not stay in lockstep — otherwise ~165 probes
  land in the same instant each minute instead of spread across it.
  Deliberately not in the upsert's DO UPDATE: a re-seed must not re-herd them.

Steady state becomes ~180k SSH/day (down from ~363k) and 5 apt runs/day
(down from 14,400), with each 60s check landing at its own point in the minute.

Also renumbers 022→023, 023→024, 024→025: origin/main added its own
022_knowledge_revisions, and prod has already applied version 22. Left
colliding, prod would have skipped the monitoring_spec migration entirely and
then failed the seed on a missing column.

Co-Authored-By: Claude <noreply@anthropic.com>
2026-07-28 14:03:30 +02:00
1dca2cfd7a feat(observability): restore monitoring coverage, make gaps visible, stream executions
Monitoring coverage was 3 of 89 active entities. Three bugs, each hidden by
discarded errors in checkdefaults:

- writeCheck generated a fresh uuid, inserted the check entity ON CONFLICT
  (slug) DO NOTHING, then wrote a check_defs row referencing it. On any
  re-seed the slug already existed, the entity insert no-oped, and the FK
  violated — aborting the ingest transaction and surfacing as an unrelated
  failure several entities later. Re-seeding has been broken since; prod's
  coverage was frozen at its first successful seed. This is what
  TestSeedIngestIdempotentAndNoDuplicateEdges had been reporting.
- shortSlug truncated to the last 8 chars, so all 21 ingress routes collapsed
  to ".network" and overwrote each other; service:jellyfin collided with
  lxc:jellyfin.
- The ssh-script checker never read the `args` config checkdefaults wrote, so
  process_check.sh always ran without its unit name and returned "unknown".

Coverage is now 75/89. Monitoring is declared per entity type in
seeds/ontology.yaml and resolved through the is-a hierarchy, so a type can say
it warrants nothing (site, lan, mesh, cluster) and never be reported as a gap.
coverageSweep raises an `unmonitored` signal only where a type declares
monitoring it lacks — 8 real gaps, no false positives.

Also:
- entity_types.attribute_schema was never ingested: the seed loader read
  "attribute_schema" but the YAML says "attributes", so all 60 types stored
  JSON null.
- ListExecutions ignored its declared target/action/correlation_id filters and
  paginated on a non-unique target slug, dropping and repeating rows.
- started_at was captured but only written at terminal state, so a running
  execution reported NULL for its whole life. The three MCP auto-run copies
  wrote no timing at all; they are now one autoRun helper.
- SSH output was buffered to completion and discarded entirely on timeout.
  Both sshExec copies now stream through a shared execlog sink into
  execution_logs, and keep partial output when a command is cancelled.
- executions.correlation_id was a random per-execution uuid that correlated
  nothing; it is now the chat session id, which is what lets the chat tail
  live output.
- reversible_low had no auto-run branch despite policy declaring it
  unattended. Since computeCommandRisk never returns it, the class only arises
  when an agent declares it over a read_only command — so gating it penalised
  candor without adding safety.
- backup-target gains a backup-freshness checker (portable find -mmin, since
  the first target is on macOS), resolving its host by walking backs-up-to
  backwards. The pre-deploy pg_dump is now a tracked backup target.

UI: an Executions section on entity detail with live output tailing, and
streamed output under a running `run` call in the chat timeline.

Migrations 022-024. Ops.svelte and context.ts exclude execution.output from
their refetch triggers, which would otherwise fire once a second per command.

Co-Authored-By: Claude <noreply@anthropic.com>
2026-07-28 13:51:14 +02:00
ce0e4142ff feat(api): add knowledge base write path, revision history, and drift tooling
The Knowledge page was read-only from the HTTP API — the only writer was
the agent's MCP upsert_knowledge tool. Adds create/update/soft-delete/
restore/trash endpoints, a DB-trigger-backed revision history (catches
both the web UI and the MCP tool), and maintenance endpoints: duplicate
detection (pg_trgm + complete-linkage clustering), tag rename/normalize,
orphan detection, and merge.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
2026-07-27 22:50:29 +02:00
e055a7c6ce feat(nomos): session-review improvements (P0/P1/P2 from 2026-07-20 audit)
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Classifier now unwraps pct exec / qm guest exec / bash -c / sh -c / sudo
and env-var assignments before classification, so read-only inspection
wrapped in pct exec no longer escalates to config_mutation. curl GET
(default method, no -d/-F/-T/-o/>) is read-only. Eliminates the three
duplicate rclone sessions (a51e2086, 8acea2e3, cb8c8a4a) that bounced
off the classifier for the same goal.

New classify_command MCP tool: command-scoped preflight that returns the
exact risk class run would assign. Documented in SOUL.md with guidance
to pre-classify before run when the verdict is uncertain.

set_goal surfaces prior partial/failed sessions from the last 24h so the
agent picks up the thread instead of rediscovering it.

completeTask auto-closes in-flight plan steps (pending/running -> done
on success, skipped on partial/failure), so one-step plans no longer
need the per-step running->done dance right before completion.

Migration 021 adds blocker + closed_at to agent_sessions. completeTask
sets closed_at once and derives a structured blocker reason
(approval_timeout, user_abandoned, classifier_overreach, model_refusal,
tool_error, ...) from the last assistant message.

/sessions list now carries message_count, tool_call_count,
duration_seconds (server-side aggregates — no more N+1 transcript
fetches to audit a fleet). GET /sessions/{id} returns both metadata
and messages. New query params filter + paginate: outcome, status,
entity_id, blocker, since (RFC3339 or Go duration), cursor, limit.

Titles now prefer the goal when set; sessions without a goal fall back
to the first assistant text.

New GET /sessions/{id}/tool_calls flat view for audit scripts.

Plan: plans/2026-07-20-session-review-ten-sessions.md. VERSION 0.7.12 -> 0.7.13.
2026-07-20 11:32:31 +02:00
e3a0326c78 docs: codebase review + documentation maintenance pass
Full review (plans/2026-07-17-codebase-review-and-cleanup.md) covering Go,
web SPA, and docs. Applied low-risk doc/tooling fixes; code refactors and
dead-code deletions are listed as actionable recommendations pending approval.

Doc fixes:
- AGENTS.md: remove ghost of retired request_execution (contradicted the
  retire notice above it); fix knowledge/wiki/ -> archive/knowledge/;
  replace brittle counts (33 tools, 36 docs, 20 checks) with pointers to
  source; drop point-in-time dates.
- OIKOS.md: fix broken plan link (now in done/); 001-011 -> 001-020;
  15 MCP tools -> pointer; replace hardcoded knowledge counts.
- README.md: 15 tools -> pointer; fix wails plan link (now in done/);
  complete internal/ package list (add checkdefaults, observability, safego);
  add cmd/desktop/ to repo layout.
- commands.md, page-templates.md: fix broken links; HERMES.md -> NOMOS.md.

Plans housekeeping:
- Move 4 done 2026-07-14 plans from plans/ to plans/done/.
- Reconcile plans/index.md: add the 2 missing 2026-07-14 entries and the
  2 missing 2026-07-15 done entries; add this review.
- Fix stale plan path in migrations/020 comment.

New docs:
- docs/index.md and docs/operations/README.md (folder READMEs per
  writing-style.md).

Tooling:
- web/package.json: add check/typecheck/lint scripts + svelte-check devDep.
- Makefile: desktop-package version now reads from VERSION file instead of
  hardcoded 0.1.0.

VERSION 0.7.6 -> 0.7.7 (patch: docs + tooling only).
2026-07-17 22:04:54 +02:00
60effcb2fe session reliability: reconnect, knowledge loop, retire request_execution
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Phase 1 — crash recovery: SSE auto-reconnect + backoff, polling gate
during disconnect, connection banner with retry button, empty-response
retry 3x, non-terminal resume on empty response, persistent error cards.

Phase 2/4 — visibility + continuation: custom ExecutionStatus renderer,
approvals extracted on every tool_result (not just done), activity bar
with status/goal, SessionDigest live polling, Continue button.

Phase 3 — cleanup: complete_task auto-cancels orphaned approvals,
deletes assent/destructive window keys, propose_plan marks pending
steps as replaced, plan step seq-order enforcement.

Phase 5 — knowledge loop: list_lxcs state filter (active/destroyed),
SOUL.md unmissable writeback section, propose_plan validation nudge,
complete_task writeback check, upsert_knowledge about array support,
plan generation grouping in frontend, session approval count badge.

Retire request_execution — all mutations now route through run.
Updated SOUL.md, AGENTS.md, CLIENTS.md, skills, and agent system notes.

Migration 020: plan step generation column, audit_log session_id index,
nomos_plan_executions pending-approval index.
2026-07-14 11:03:23 +02:00
3b9c75fa3f fix(agent): task completion safety net — stop tasks sticking at Running
Implements fixes 1-3 of plans/2026-07-11-task-completion-safety-net.md.
Confirmed live that 50/50 production sessions never reached a terminal
status because the model almost never calls complete_task, even for
trivial single-tool Q&A turns SOUL.md explicitly calls out as needing it.

- Inline safety net (agent.go): a session that never called set_goal never
  framed itself as a structured task, so its first plain-text turn-end IS
  the task ending — auto-complete it there instead of leaving status stuck
  at its creation default forever.
- Idle sweep (continue.go, new completion_nudges column): goal-bearing
  sessions that stall get one nudge, then auto-close with outcome=partial
  if the nudge goes unanswered, mirroring the pattern resumeSession already
  uses for a different stuck-session failure mode.

Fix 4 (backfill of the 50 already-stuck live sessions) is deliberately
separate — deferred until this is deployed and verified live, per the
plan's implementation order.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
2026-07-11 22:11:24 +02:00
72e9fe534e feat(tasks): phase 1 — elevate chat session to a task (schema + task entity)
Migration 018 adds goal/status/outcome/summary/entity_id to agent_sessions
and creates session_plan_steps + session_questions. Registers a 'task'
entity type and an 'involves' (task→entity) relationship in the ontology
so each session anchors its knowledge and involved-entity edges on the
existing relationships graph.

nomos createSession now mints a task:<session-id> entity (type task) and
links it via agent_sessions.entity_id — best-effort so chat never blocks on
it. listSessions/GET /sessions surface the new task fields.

No behaviour change yet; this is the data foundation for the task board and
live context panel. Verified end-to-end against the local stack: migration
applied, ontology ingested (60 types/47 rels), a new session mints a linked
task entity and the API returns status/goal/entity_id.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-11 12:25:28 +02:00
d2f749d33d feat: event-driven auto-continuation — agent runs an approved plan to completion
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The root cause behind "the agent stops at the first error and doesn't recover":
provisioning executions run ASYNCHRONOUSLY (pct_create fires the SSH work in a
goroutine and returns "running" immediately), so the agent's turn ENDS before
the result exists. The agent literally isn't running when the step fails — it
can't react to a failure it never observes. The only thing that fed results
back was the operator typing "continue" after every async step: the human was
the event loop. (In the flagged 18-message session the operator typed
continue/proceed/?? eight times while the agent correctly diagnosed each failure
but couldn't advance a step on its own.)

This makes the system the event loop instead:

- migrations/017: nomos_plan_executions links each gated execution to the chat
  session that started it.
- cmd/nomos: after a tool result, any "execution <uuid>" it started is linked
  to the session. A background worker (continue.go) polls for those executions
  reaching a terminal state and — while the agent has an open assent window (an
  approved plan is in flight) — re-invokes the agent with the result
  ("execution X completed/failed: <result>"), so it proceeds to the next step
  or diagnoses+fixes the failure, with no operator tick. Guarded against loops
  (mark-continued before running) and bounded by the 30-min window.
- chatWith(): chat() variant that injects the finished-execution note after
  replayed history without persisting a fake user turn.
- DecideApproval: approving a step by ANY route (button or chat-assent) now
  opens the assent window, so auto-continuation works regardless of how the
  operator approved — previously only typing "go ahead" opened it.
- SOUL: the agent is told it will be auto-re-invoked when async steps finish —
  don't poll get_execution_status, don't wait for "continue"; end the turn and
  keep going step by step until the goal is verified or a genuine blocker.

This is the root fix, not another per-command patch: you can't enumerate every
failure of an unbounded action space, but you can give the agent a loop that
observes each result and adapts — because "do anything" always includes "the
first attempt failed."

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-07-10 14:19:43 +02:00
279549c8c9 fix: scheduler wrote health/metrics/events to probe entities, not targets
Problem: every host/service/lxc/etc. entity_status row was permanently
stuck at 'unknown' since creation. Verified against the live DB:
metric_samples had 17,559 rows, 100% attached to type='check' probe
entities and 0% to any real monitored entity; only 25 check entities
ever had real health written. check_defs.entity_id (the probe's own
bookkeeping entity) and check_defs.target_id (the host/service actually
being observed) were both real fields, but the scheduler wrote
UpsertEntityStatus/InsertMetricSample/emitSchedulerEvent keyed by
entity_id instead of target_id — so every check ran and every result
was real, it just landed on the wrong row. This is the mechanism behind
observed drift: the agent's dashboard/health tools reported the
internal probes' state, never the actual fleet.

Change:
- scheduler.go: runCheck/resolveSignal now resolve targetID from
  cd.TargetID (falling back to the check's own id if unset) and write
  status/metrics/events there. Signals stay keyed by the check entity,
  unchanged, matching their existing resolution logic.
- Added a staleness sweep to housekeeping(): an entity whose last
  observation is older than 3x its fastest enabled check's interval
  (floor 5m) is marked 'stale' and emits health.stale, so a stalled
  scheduler or disabled check_def can no longer look like current data
  forever.
- migrations/016: deletes the now-orphaned check-entity entity_status
  rows so dashboard/fleet-health rollups stop double-counting probes as
  monitored entities. Historical metric_samples on check entities are
  left as-is (time-series data, not safe to reattribute).
- openapi.yaml + regenerated gen code: Entity gains health/last_check_at;
  'stale' added to the health enum everywhere it's used.
- dashboard.go / GetFleetHealth / nomos's get_health_summary MCP tool:
  exclude type='check' entities from rollups.
- nomos/agent.go: replay prior turns' tool_use/tool_result pairs into
  the conversation instead of dropping them (previously only final text
  was replayed, forcing the agent to re-derive fleet state every turn),
  and inject a compact live fleet-health snapshot into the system prompt
  each turn so it starts oriented instead of spending an iteration on
  discovery.

Risk: config_mutation (schema-adjacent — new migration, no destructive
DDL, additive DELETE only on orphaned rows). No behavior change until
oikos-api/oikos-scheduler/nomos are rebuilt and redeployed.

Verification: go build/vet clean across the repo. Ran this worktree's
own API binary against the live dev Postgres on an alternate port
(read-only from the live containers' perspective) and confirmed
/api/v1/entities now returns health/last_check_at, and the dashboard
health rollup dropped from double-counting to an honest 168 unmonitored
entities (matches reality pre-deploy — the live scheduler hasn't run
the fixed code yet). Confirmed check_defs.target_id correctly maps
multiple checks to host:hubris via direct psql query.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
2026-07-09 00:26:04 +02:00
e8e230b4a5 nomos+web: streaming, provider routing, event gap-fill, embedded UI; fix approval FK & session context
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Agent (cmd/nomos):
- Stream LLM tokens via NewStreaming; emit text_delta then final text.
- OpenRouter provider routing: data_collection=deny (ZDR) + require_parameters;
  NOMOS_PROVIDER_SORT opt-in; Exacto via model suffix.
- Multi-turn: reload session history into context; UI passes session id.
- Fix agent_activity logging (agent_id/session_id) and mcpClient data race.

Events (live control-room feed):
- approval.created (mcp), approval.decided (api), execution.completed/failed
  (approved-action path), signal.raised/resolved + health.changed (scheduler,
  transition-gated).

Fixes:
- createApproval FK violation (reuse execution entity) — the agent's only
  write path; log the previously-swallowed errors.

Web UI:
- Embed web/dist via //go:embed (single binary); Dockerfile builds SPA into
  the Go stage; committed .gitkeep placeholder keeps backend-only builds green.
- Caddy: Authentik-gated /agent/* -> nomos so the UI reaches the agent
  same-origin in production.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-08 15:22:27 +02:00
2b3aa248b1 N0: rename Hermes → Nomos (standalone commit)
Problem: "Hermes" collides with Nous Researchs unrelated product;
  unclear identity for the resident agent.

  Change: Rename the live service identity across 39 files:
  - cmd/hermes/ → cmd/nomos/ (binary, env vars NOMOS_*)
  - internal/config/ server.go (NomosAgentSlug, nomosAgentID)
  - compose/hermes/ → compose/nomos/ (Dockerfile, service name)
  - hermes/ → nomos/ (SOUL.md, config.yaml, skills/)
  - .agents/HERMES.md → NOMOS.md (persona)
  - tools/setup-hermes-soul.sh → setup-nomos-soul.sh
  - seeds/inventory.yaml (agent:hermes → agent:nomos)
  - migrations/014_rename_agent_hermes_to_nomos.up.sql
  - Caddy vhost hermes.hubris.network → nomos.hubris.network
  - All referencing docs, scripts, ADR notes

  History preserved: archive/, plans/done/, ADRs not rewritten.
  Matrix @hermes notifier account and Legacy bin/hermes on LXC 129
  intentionally untouched (out of scope).

  Risk: N0 is identity-only rename; zero behavioral changes.
  Verification: go build ./... passes; docker compose --profile full
  resolves nomos service; grep -ri hermes (excluding archive/plans)
  returns only intentional refs (LLM model name, Matrix user).
2026-07-08 14:14:56 +02:00
7c6cffb5f5 complete MCP tool surface — Matrix approval webhook loop + token verification
Plan #6 (MCP Tool Completion / bin/homelab Migration) done.

- Approval records created for gated request_execution actions
- Notifier sends Matrix messages with HMAC approval tokens
- Stores matrix_event_id, polls /relations/{id}/m.annotation for /
- Reaction detection triggers DecideApproval API call
- Token verification added to DecideApproval endpoint
- Migration 013: matrix_event_id + alert_sent_at on approvals
- AGENTS.md: 21-tool surface documented, stale homelab CLI refs removed
- Plan index updated, audit cross-reference refreshed
2026-07-08 11:02:06 +02:00
5b22f2367b test: e2e client lifecycle + ADRs with sequence diagrams
Some checks failed
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- client_lifecycle_test.go: full end-to-end integration test
  planned → provisioning (enroll) → active → migrating → active →
  deprecated → failed. Validates age keypair generation, attrs,
  context/secrets endpoints, invalid transition blocking, compute
  entity provisioning with relationship edges and status tracking.
  Also tests enrollment rejection for invalid states and duplicate
  slug rejection for provisioning.

- adr/0011-client-lifecycle-flows.md: workstation self-enrollment,
  compute entity provisioning, deprecation/destruction flows with
  Mermaid sequence diagrams. Full lifecycle state diagram. Transition
  check enforcement documentation.

- adr/0012-hermes-oikos-interactions.md: Hermes ↔ Oikos interaction
  flow through OODA loop phases. Thin client bootstrap. Internal
  component interactions (scheduler, actuator, notifier). Complete
  30-tool ownership matrix.

- Fix: migration 012 FK reference (executions.id → executions.entity_id)
- Fix: provision handler null attributes JSONB
- Fix: provisioning steps use entity_id for execution FK

All 3 integration tests pass, go vet clean.
2026-07-08 00:56:16 +02:00
44e1e421e1 feat: client enrollment API and compute entity provisioning
Phase 1 implementation from the client-lifecycle plan.

- Migration 012: provisioning_steps table, context_version, context_files,
  enrolled_at column, slug+type index for machine entities
- API endpoints (openapi.yaml + generated code):
  POST /clients/enroll — age key issuance, Infisical identity, state transition
  GET /clients/{slug}/context — agent file delta polling (replaces git pull)
  GET /clients/{slug}/secrets — scoped secret listing
  POST /entities/provision — compute entity creation with constraint validation
  GET /entities/{slug}/provision/status — step-by-step provisioning progress
- Handlers in impl.go: enrollment with state validation and age key generation,
  provisioning with execution tracking and relationship creation,
  context endpoint with since-based delta queries
- Server struct extended with secretsBackend interface for key storage
- All tests pass, build clean
2026-07-08 00:24:32 +02:00
6b75f7302d db as source of truth: wiki→seeds, archive old artifacts, knowledge ingestion
- Migrations 010 (content_hash) + 011 (search tsvector column)
- new: internal/knowledge/seed.go — knowledge seed ingest engine
- new: internal/httpapi/knowledge.go — SearchKnowledge + GetEntityKnowledge
- wire knowledge ingest into oikos seed pipeline
- convert all 36 wiki docs + 6 investigations + 12 runbooks → seeds/knowledge.yaml
- archive: knowledge/wiki/→archive/, oikos/cards/→archive/, .hermes/plans/→archive/
- delete: 9 superseded Python kernel files, ledger/, mcp/build_host_files.py
- remove empty knowledge/ directory tree
2026-07-07 20:22:30 +02:00
095a3967c4 phase 3: control loop — scheduler, actuator, learning, notifier, policy, API endpoints
Implemented the full OODA control loop:

Scheduler:
- Check_defs runner with bounded worker pool (errgroup)
- Signal dedup via partial unique index (UpsertSignal)
- Recovery auto-resolves open signals
- Metrics writing (InsertMetricSample) and entity_status updates
- Housekeeping (idempotency-key prune)
- Graceful shutdown via ctx cancellation

Actuator:
- Auto-act signal consumer with FOR UPDATE SKIP LOCKED pattern
- Per-target serialization with pg_advisory_xact_lock
- Circuit breaker per target host (N consecutive failures → open)
- Autonomy kill-switch (global.auto_act, never_auto_act.<slug>)
- Execution record lifecycle (proposed → running → completed)

Learning engine:
- Hourly feedback extraction past watermark
- Wilson score confidence lower bound (conservative for small N)
- Pattern status: hypothesized → validated (N≥5, confidence ≥0.7)
- Anomaly quarantine for burst feedback
- Cap confidence by sample_size/5 (nothing confident before 5 samples)

Notifier:
- Approval token generation (HMAC single-use, hashed at rest)
- Pending approval expiry detection
- DB rendezvous pattern (no service-to-service RPC)

Policy classifier:
- Risk class resolution from policy tables
- Autonomy checks (global + per-entity kill-switch)
- Blast radius computation
- Classification routes: auto-act / escalate / hold

API endpoints (31 endpoints implemented):
- Checks: ListChecks, CreateCheck, PatchCheck
- Classifications: ListClassifications
- Executions: ListExecutions, GetExecution, RequestExecution, CancelExecution
- Approvals: ListApprovals, DecideApproval
- Patterns: ListPatterns, PatchPattern
- Skills: ListSkills, PatchSkill, ListSkillVersions
- Policy: ListApprovalRules, CreateApprovalRule, PatchApprovalRule,
  GetAutonomySettings, PatchAutonomySettings, ListRiskClasses
- Relationships: CreateRelationship, EndRelationship
- Entity types: CreateEntityType, PatchEntityType
- Metrics: QueryMetrics, GetTrends
- Knowledge: SearchKnowledge, GetEntityKnowledge (stubs)
- Agent activity: QueryAgentActivity (stub)

Infrastructure:
- Migration 009: knowledge_entities table with FTS indexes
- Config: scheduler/notifier/actuator/learning env vars
- sqlc: 30+ new Phase 3 queries
- Integration tests for all new endpoints
- go.sum updated with golang.org/x/sync
2026-07-07 15:19:25 +02:00
c9975d60a5 phase 2 (part 2): sqlc queries, audit/event helpers, event NOTIFY trigger
- sqlc.yaml + internal/db/queries/*.sql: typed queries for entities,
  relationships, ontology, operations (signals, events, audit,
  idempotency, entity_status)
- internal/db/sqlcgen/: generated Go from sqlc (pgx/v5)
- internal/observability/record.go: Audit() and Event() helpers that
  write in the caller's transaction (SG10). actorLabel is interim text
  identity in detail JSON until OIDC resolution lands; actor_id column
  exists but is not yet populated
- migrations/008: post-commit pg_notify trigger on events table for
  SSE fan-out (SG8/SG10)
2026-07-07 08:49:59 +02:00
1b04683639 phase 1 review fixes: dedup edges, real export, validation, tests
Review of aa2ca0a found and fixed:
- re-ingest duplicated ALL edges (upsert conflicted on valid_from=now(),
  never fired) — migration 007 dedupes + partial unique index on current
  edges; upsert now targets it. Regression-tested.
- export was a stub that overwrote seeds/*.yaml with 11-byte "version: 1"
  files — implemented real deterministic export (ontology/inventory/policy,
  cognition-layer excluded); round-trip is byte-stable (tested)
- DB password leaked in startup logs (slog JSON bypasses String()) —
  Config now implements slog.LogValuer; regression-tested
- docker-compose had literal '***' as DB password — env-interpolated
- uuid.New() (v4) → uuid.NewV7() per ADR-0005
- no ontology validation on ingest — internal/ontology TypeTree: abstract
  instantiation rejected, relationship endpoints hierarchy-validated,
  cardinality enforced in-transaction, lifecycle states checked, default
  state applied (Phase 1 gate items, R3-1)
- getOrCreateEntityID swallowed non-ErrNoRows errors
- migration runner now holds a session advisory lock on one connection
- Makefile: hardcoded /opt/homebrew/bin/go → go; test-db target

Tests: 4 unit suites + 7 integration tests (env-guarded, throwaway DB per
run): migrate idempotent, seed idempotent + no dup edges, abstract/edge/
cardinality rejection, blast_radius cycle termination, export round-trip.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-07-07 08:11:01 +02:00
aa2ca0ae6f phase 1: Go foundation — module, migrations, domain, seed ingest
Core deliverables:
- Go module github.com/dtoro/oikos (Go 1.26.3)
- cmd/oikos: single binary with role subcommands (migrate, seed, export)
- 6 SQL migrations: ontology meta-schema, entity instances (UUID+slug,
  blast_radius recursive function), operations (signals/checks/approvals),
  cognition (classifications/executions/feedback/patterns/skills), policy,
  observability (TimescaleDB hypertables + CAGGs + retention)
- Domain layer: entity, signal, execution, classification, pattern, skill,
  approval, check types + 11 sentinel errors + lifecycle state machines
- DB layer: pgx pool, SQL splitter (handles 94436 and -- comments), migration
  runner, seed ingest (ontology+inventory+policy) with content-hash dedup
- Config: env-based with defaults, secrets redaction
- Observability: slog JSON logger with debug mode
- Infrastructure: Makefile, docker-compose.yml, multi-stage Dockerfile
  (distroless, CGO_ENABLED=0)

Verified end-to-end against timescale/timescaledb:2.17.2-pg16:
- 6 migrations applied (65 SQL statements)
- Seeds ingested: 6 lifecycles, 59 entity types, 46 relationship types,
  111 entities, 144 relationships, 4 risk classes, 27 approval rules,
  9 autonomy settings
- Idempotent: second seed run is a no-op (content hash matches)

Bugs fixed during implementation:
- TimescaleDB CAGGs can't run in a transaction -> splitSQL() executes
  statements individually
- Semicolons in -- comments treated as separators -> comment handling
- YAML keys source/target didn't match code's source_type/target_type
- yaml.Marshal produced YAML for JSONB columns -> json.Marshal
2026-07-07 01:07:26 +02:00