docs: fix plan/repo drift, retire dead Goose+Nomos and Caveman tooling

Documentation and repo-hygiene pass following the client/server split:

Plan drift (audited all other active plans against current code):
- oikos-gaps-and-improvements.md: mark Section C and D.5 resolved (both
  described cmd/hermes, renamed to cmd/nomos with a real LLM loop since);
  refresh ~10 stale file:line citations; fix tool-count (33, not 28).
- liveness-drift-and-ux-cohesion.md: fix stale default-model claim (now
  deepseek-v4-pro since 2026-07-10) and "not yet deployed" status.
- nomos-agent-code-review.md: fix C1's citation (one unauthenticated route
  to nomos now, not two, after the client/server split).
- wails-desktop-app.md: record the production deploy outcome.

Repo structure: added missing directories to README/CONTRIBUTING layout
tables (checks/, tools/, cmd/webhook/, docs/operations/), fixed a broken
link, added ADR 0015 documenting the auth/CORS/client-split model (there
wasn't one despite CONTRIBUTING's own process requiring it), normalized
ADR 0013/0014's format drift, added an Authentication section to
AGENTS.md/CLIENTS.md (every example call was missing the now-required
bearer header).

Retired the Goose+Nomos workstation flow (bootstrap.sh --with-nomos,
tools/setup-nomos-soul.sh, .agents/operations/nomos-agent.md) and the
Caveman auto-install tooling (tools/setup-caveman.sh, tools/caveman/) —
both superseded by the production containerized Nomos agent, which has
never used either. Kept .agents/shared/caveman.md itself (the terse
writing-style convention agents still follow by reading it).

Deleted the orphaned legacy Python oikos/ directory — nothing imports it,
and bin/homelab (the CLI it was kept for) no longer exists in the repo.

Rewrote .agents/operations/agent-enrollment.md (365 -> ~110 lines) and
commands.md to match the current architecture instead of the retired
`homelab` CLI; migrated the still-true networking prerequisites (Netbird,
split-horizon DNS, SSH key distribution) into the knowledge base as a
runbook via upsert_knowledge rather than duplicating them in markdown.
Updated all 10 .agents/skills/ runbooks referencing the dead CLI with
their real MCP tool / REST API equivalents, or flagged them as needing
verification where no equivalent is confirmed yet.

Two real bugs found and fixed, not just docs:
- The tools/setup-*.sh auto-setup glob was tools/*.setup.sh in THREE
  places (tools/post-pull.sh, bootstrap.sh, and internal/httpapi/impl.go's
  GetClientContext handler) since the mechanism's introduction on
  2026-06-02 — never matched any real filename, so no client has ever
  picked up an auto-setup script via git-pull or the context-poller sync.
  Fixed all three; the Go server-side fix is the one that actually matters
  since it's what the current context-poller mechanism depends on.
- bootstrap.sh removed dead vestigial --gitea-token/--gitea-user flags
  (parsed, never consumed) left over from an earlier clone-based model.

Also flagged, not fixed (documented as an open gap in
client-enrollment/SKILL.md): bootstrap.sh tells a freshly-enrolled client
to call POST /api/v1/clients/{slug}/activate to finish enrollment, but
that route doesn't exist in api/openapi.yaml — EnrollClient sets entities
to provisioning and nothing currently transitions them to active.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>

docs/adr/0013-signal-triggers.md

@@ -1,4 +1,7 @@
-# Signal Trigger Architecture
+# ADR 0013 — Signal trigger architecture
+
+**Status:** Accepted
+**Date:** 2026-07-08
 
 ## Overview
 

docs/adr/0014-entity-model.md

@@ -1,6 +1,6 @@
-# Oikos Entity Model — Types, Relationships & Interactions
+# ADR 0014 — Entity model: types, relationships & interactions
 
-**Status:** Adopted
+**Status:** Accepted
 **Date:** 2026-07-08
 **Scope:** Full inventory of every entity type, relationship, state machine, and
 cognition pipeline — with clear markers for what is **code-real** vs **schema-only**.

docs/adr/0015-api-bearer-auth-client-server-split.md

@@ -0,0 +1,62 @@
+# ADR 0015 — Bearer-token auth for every route + client/server split
+
+Status: accepted (2026-07-12) · Plan: plans/2026-07-12-wails-desktop-app.md, Phase 0
+
+## Context
+The control-room SPA was embedded in the `oikos` binary (`go:embed`,
+ADR 0001) and served at `/ui/*`. `combinedAuth` (`internal/httpapi/server.go`)
+opened a dev-open bypass — no credential required at all — whenever
+`OIKOS_ENV=dev` and no static token/OIDC issuer was configured. That was
+true not just in local dev but in the actual mac-mini production deploy:
+`docker-compose.yml`'s `api` service hardcoded `OIKOS_ENV: dev` with no
+token set, so every route (`/api/v1/*`, `/mcp`, and an `/agent` reverse-proxy
+mount to nomos that had never been wrapped in `combinedAuth` at all) was
+reachable unauthenticated from anywhere on the mesh/LAN. A planned Wails
+desktop client and any future non-browser client can't rely on same-origin
+requests or a dev-open bypass; they need the SPA to be a standalone,
+CORS-capable client that authenticates over HTTP like any other caller.
+
+## Decision
+- Delete the SPA embed (`web/embed.go`, the `/ui/*` routes). `web/` is a
+  standalone static build, deployed separately (`make ui` / `make
+  deploy-ui`), served at `/` by Caddy with SPA fallback.
+- Remove the dev-open bypass entirely. Every route requires a valid
+  static bearer token (`OIKOS_API_TOKEN` / `OIKOS_MCP_BEARER_TOKEN`) or an
+  OIDC JWT, with two narrow exceptions: `/healthz` (liveness) and
+  `POST /api/v1/clients/enroll` (IP-gated in the handler instead).
+  `GET /api/v1/events/stream` additionally accepts the token as a
+  `?token=` query param, since `EventSource` can't set custom headers.
+- Add CORS (`github.com/go-chi/cors`, `OIKOS_CORS_ORIGIN`, default `*`) so a
+  cross-origin SPA (Vite dev server, a future Wails webview) can reach the
+  API. No `AllowCredentials` — auth is a header, not a cookie, so
+  credentialed CORS mode isn't needed and the two don't combine safely with
+  a wildcard origin.
+- Wrap the previously-unauthenticated `/agent` proxy mount in the same
+  `combinedAuth` middleware as every other route.
+- `cmd/nomos` becomes an authenticated client of `api`: it now sends
+  `Authorization: Bearer $OIKOS_MCP_BEARER_TOKEN` on its own outbound calls
+  (MCP + the chat-assent approval-decision endpoint), which it never did
+  before — dev-open covered for it until now.
+- The SPA gets a runtime config module (`web/src/lib/config.ts`) and a
+  first-launch `Config.svelte` screen: server URL + token, stored in
+  `localStorage`, injected into every `fetch()` via a shared
+  `fetchWithAuth` wrapper. Resolved fresh per request (not cached at
+  module-load time), so the same build works same-origin or cross-origin
+  without a rebuild.
+
+## Consequences
+- Closing dev-open was a live security fix, not just future-proofing —
+  verified post-deploy that unauthenticated requests to production now 401.
+- Nomos's *own* HTTP gateway (`cmd/nomos`, port 8092) still has no auth of
+  its own — out of scope here, tracked separately
+  (plans/2026-07-11-nomos-agent-code-review.md, finding C1).
+- Production Caddy (`dtoro/caddy-conf`, not this repo) does not yet expose
+  `oikos.hubris.network` at all, so the interaction between Authentik
+  forward-auth and bearer-token clients (a non-browser client can't
+  complete a browser SSO redirect) is unresolved — needs an `@enroll`-style
+  bypass for `/api/v1/*`/`/mcp`/`/agent/*` before public exposure. This
+  repo's `compose/caddy/Caddyfile.oikos` (a reference copy, not deployed
+  from here) has the bypass; the real config does not yet.
+- There is one shared bearer secret for all agents/clients, not per-client
+  tokens — acceptable for the current fleet size, revisit if per-client
+  revocation becomes necessary.

docs/adr/README.md

@@ -5,7 +5,7 @@ after acceptance — superseding decisions get a new ADR that links back.
 Statuses: proposed | accepted | superseded-by-NNNN.
 
 | ADR | Title |
-|---|---|---|
+|---|---|
 | [0001](0001-go-single-binary.md) | Go with single-binary role packaging |
 | [0002](0002-postgres-timescale-only-datastore.md) | PostgreSQL + TimescaleDB as the only datastore |
 | [0003](0003-db-native-ontology-yaml-seeds.md) | DB-native ontology with YAML seed manifests |
@@ -16,7 +16,8 @@ Statuses: proposed | accepted | superseded-by-NNNN.
 | [0008](0008-forward-only-migrations.md) | Forward-only migrations |
 | [0009](0009-sse-over-websocket.md) | SSE over WebSocket for the event stream |
 | [0010](0010-infisical-with-sops-fallback.md) | Infisical secrets with SOPS DR fallback |
-| [0011](0011-client-lifecycle-flows.md) | Client lifecycle flows — enrollment, bootstrap, sync |
-| [0012](0012-hermes-oikos-interactions.md) | Hermes–Oikos interactions — agent/OS contract |
-| [0013](0013-signal-triggers.md) | Signal triggers — host health checks via scheduler |
+| [0011](0011-client-lifecycle-flows.md) | Client lifecycle sequence diagrams |
+| [0012](0012-hermes-oikos-interactions.md) | Hermes/Oikos interaction architecture |
+| [0013](0013-signal-triggers.md) | Signal trigger architecture |
 | [0014](0014-entity-model.md) | Entity model — types, relationships, state machines, OODA loop |
+| [0015](0015-api-bearer-auth-client-server-split.md) | Bearer-token auth for every route + client/server split |